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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs199637494 chr19:43585708 G/GTC 0.000256 485 15.32 18.3 10.08 KM Plot
THCA rs199656352 chr15:77398701 CTATT/C 0.000137 481 14.93 19.27 16.2 KM Plot
THCA rs199658979 chr14:59777679 G/GA 1.63E-8 484 16.3 13.5 5.45 KM Plot
THCA rs199660223 chr2:48052230 AT/A 1.08E-7 488 15.32 17.93 8.27 KM Plot
THCA rs199699660 chr16:20587707 G/A 8.45E-7 476 15.83 17.63 17.08 KM Plot
THCA rs199725747 chr11:57122863 A/ATGCAGTAG 0.000295 488 16.2 15.07 17.63 KM Plot
THCA rs199725832 chr2:201818148 TTA/T 0.000142 474 15.97 16.3 4.72 KM Plot
THCA rs199742561 chr2:29075168 T/G 8.83E-5 477 14.3 16.67 15.97 KM Plot
THCA rs199825001 chr16:15161448 T/C 0.000137 489 16.65 13.9 14.9 KM Plot
THCA rs199825576 chr13:108908169 CTT/GTT 2.18E-9 483 15.2 17.77 14.22 KM Plot
THCA rs199846109 chr6:24424448 CT/CTT 9.44E-15 480 16.37 14.77 12.9 KM Plot
THCA rs200060407 chr6:46110097 AATAT/A 5.54E-5 489 15.7 16.47 27.37 KM Plot
THCA rs2000852 chr11:133838221 C/T 0.00019 490 16.02 15.9 8.73 KM Plot
THCA rs2000853 chr11:133838417 A/G 0.00019 490 16.07 15.9 8.73 KM Plot
THCA rs200104573 chr10:81734810 T/TG 0.000198 490 15.93 15.9 13.5 KM Plot